Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNMDTenomodulin. (314 aa)    
Predicted Functional Partners:
MKX
Homeobox protein Mohawk isoform X1.
      
 0.795
FMOD
Fibromodulin.
   
  
 0.707
DCN
Decorin.
      
 0.696
KERA
Keratocan.
   
  
 0.627
ACAN
Aggrecan core protein isoform X1.
   
  
 0.620
TCF15
Transcription factor 15.
      
 0.536
SCX
Basic helix-loop-helix transcription factor scleraxis.
      
 0.536
THBS4
Thrombospondin 2/3/4/5.
   
  
 0.483
COMP
Cartilage oligomeric matrix protein isoform X1.
   
  
 0.483
FAT4
Protocadherin Fat 4.
      
 0.479
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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