Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1Activated RNA polymerase II transcriptional coactivator p15. (133 aa)    
Predicted Functional Partners:
SYMPK
Symplekin.
    
 
 0.858
GTF2B
Transcription initiation factor TFIIB.
    
 
 0.786
CNBP
Cellular nucleic acid-binding protein isoform X1.
   
 
 0.730
SUPT5H
Transcription elongation factor SPT5.
    
 
 0.719
FRMPD1
FERM and PDZ domain-containing protein 1 isoform X1.
      
 0.669
TMEM51
Transmembrane protein 51.
      
 0.669
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.662
SPATS2L
SPATS2-like protein isoform X1.
      
 0.655
SLC2A13
MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13.
      
 0.632
GTF3C1
DNA-3-methyladenine glycosylase isoform X1.
    
 
 0.623
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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