STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1Activated RNA polymerase II transcriptional coactivator p15. (133 aa)    
Predicted Functional Partners:
SYMPK
Symplekin.
    
 
 0.957
GTF2B
Transcription initiation factor TFIIB.
   
 
 0.688
ARL6IP4
ADP-ribosylation factor-like protein 6-interacting protein 4.
      
 0.557
POMP
Proteasome maturation protein isoform X1.
   
  
 0.541
C11orf58
Small acidic protein.
   
    0.540
SUPT5H
Transcription elongation factor SPT5.
    
 
 0.530
FRMPD1
FERM and PDZ domain-containing protein 1 isoform X1.
      
 0.519
TMEM51
Transmembrane protein 51.
      
 0.519
SPATS2L
SPATS2-like protein isoform X1.
      
 0.518
SLC2A13
MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13.
      
 0.501
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.