STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD2FAST kinase domain-containing protein 2, mitochondrial. (689 aa)    
Predicted Functional Partners:
MTERF3
Transcription termination factor 3, mitochondrial isoform X1.
   
 0.974
TRUB2
Probable tRNA pseudouridine synthase 2 isoform X1.
   
 0.971
DDX28
Probable ATP-dependent RNA helicase DDX28.
   
 
 0.961
PTCD1
Pentatricopeptide repeat-containing protein 1, mitochondrial.
   
 
 0.944
GRSF1
G-rich sequence factor 1.
   
 
 0.814
RPUSD3
RNA pseudouridylate synthase domain-containing protein 3 isoform X1.
   
 0.786
RPUSD4
RNA pseudouridylate synthase domain-containing protein 4.
   
 0.786
YARS2
Tyrosine--tRNA ligase, mitochondrial.
   
   0.775
SUPV3L1
ATP-dependent RNA helicase SUPV3L1, mitochondrial.
   
  
 0.722
ENSPVIP00000005872
annotation not available
   
 0.721
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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