Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TARS1Threonine--tRNA ligase, cytoplasmic. (711 aa)    
Predicted Functional Partners:
TARS3
Probable threonine--tRNA ligase 2, cytoplasmic.
  
0.977
TARS2
Threonine--tRNA ligase, mitochondrial.
  
  
 
0.901
LARS1
Leucine--tRNA ligase, cytoplasmic isoform X1.
  
 
 0.888
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.868
RARS1
Arginine--tRNA ligase, cytoplasmic.
  
 
 0.824
KARS1
Lysyl-tRNA synthetase, class II.
  
 
 0.813
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.795
IARS1
Isoleucine--tRNA ligase, cytoplasmic.
  
 
 0.771
GARS1
Glycyl-tRNA synthetase.
   
 
 0.757
AIMP1
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1.
  
 
 0.745
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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