STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARS1Threonine--tRNA ligase, cytoplasmic. (711 aa)    
Predicted Functional Partners:
TARS3
Probable threonine--tRNA ligase 2, cytoplasmic.
  
 
 
0.922
TARS2
Threonine--tRNA ligase, mitochondrial.
  
  
 
0.901
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.856
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.822
LARS1
Leucine--tRNA ligase, cytoplasmic isoform X1.
  
 
 0.734
EIF4E2
Eukaryotic translation initiation factor 4E type 2 isoform X1.
   
 
 0.702
VARS1
Valyl-tRNA synthetase.
  
  
 0.700
MTIF2
Translation initiation factor IF-2, mitochondrial.
  
 0.688
MRPL27
39S ribosomal protein L27, mitochondrial.
  
 
 0.687
MRPL22
39S ribosomal protein L22, mitochondrial.
   
 
 0.684
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.