STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPKOWG patch domain and KOW motifs-containing protein isoform X1. (489 aa)    
Predicted Functional Partners:
DHX16
DEAH-box helicase 16.
    
 0.997
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
   
 0.981
BUD13
Pre-mRNA-splicing factor CWC26.
   
 
 0.949
CWC27
Peptidyl-prolyl cis-trans isomerase CWC27 homolog.
    
 0.890
CWC22
Pre-mRNA-splicing factor CWC22 homolog.
    
 0.874
RNF113A
RING finger protein 113A isoform X1.
   
  0.860
PPIL2
Peptidyl-prolyl cis-trans isomerase-like 2.
    
 0.851
SF3B3
Splicing factor 3B subunit 3.
   
   0.769
ENSPVIP00000022408
annotation not available
    
 
 0.740
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.740
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.