STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFE3Transcription factor E3. (219 aa)    
Predicted Functional Partners:
KIT
Proto-oncogene tyrosine-protein kinase Kit.
   
 0.865
KITLG
KIT ligand.
     
 0.839
XPO1
Exportin-1.
     
 0.806
SUMO1
Small ubiquitin-related modifier 1.
    
 0.787
EP300
Histone acetyltransferase p300 isoform X1.
    
 0.786
TFEB
Transcription factor EB.
   
  0.784
SIRT1
Sirtuin 1.
     
 0.781
LEF1
Lymphoid enhancer binding factor 1.
    
 0.752
TNFSF11
Tumor necrosis factor ligand superfamily member 11.
     
 0.735
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
    
 0.734
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.