Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS2Calpain small subunit 1-like. (244 aa)    
Predicted Functional Partners:
CAST
Calpastatin isoform X1.
   
 0.879
CAPN7
Calpain-7.
   
 0.813
LOC110071084
Calpain-1 catalytic subunit-like.
 
 
 0.793
CAPN6
Calpain-6.
 
 
 0.702
CAPN15
Calpain-15.
   
 0.671
ENSPVIP00000000820
Calpain-5-like.
   
 0.658
ENSPVIP00000004288
annotation not available
   
 0.658
ENSPVIP00000000165
annotation not available
   
 0.643
CAPN12
Calpain-12.
   
 0.643
ENSPVIP00000001062
annotation not available
   
 0.643
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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