STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RXRB-2Retinoic acid receptor RXR-beta. (293 aa)    
Predicted Functional Partners:
PPARA
Peroxisome proliferator-activated receptor alpha.
   
 0.874
NR1H2
Oxysterols receptor LXR-beta.
   
 0.838
NR1H3
Oxysterols receptor LXR-alpha isoform X1.
   
 0.838
PPARG
Peroxisome proliferator-activated receptor gamma isoform X1.
    
 0.820
MED1
Mediator of RNA polymerase II transcription subunit 1.
    
 0.799
PPARD
Peroxisome proliferator activated receptor delta.
    
 0.735
NCOA6
Nuclear receptor coactivator 6.
   
 0.714
NR1H4
Bile acid receptor isoform X1.
   
 0.707
LOC110072318
Bile acid receptor-like isoform X1.
   
 0.703
ENSPVIP00000004465
annotation not available
   
 0.684
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.