STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR42E1Short-chain dehydrogenase/reductase family 42E member 1. (396 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.998
CYP51A1
Lanosterol 14-alpha demethylase.
 
 
 0.870
HSD17B7
17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase.
   
 0.859
SQLE
Squalene monooxygenase.
   
 
 0.851
SC5D
Delta7-sterol 5-desaturase.
   
 0.829
ERG28
Probable ergosterol biosynthetic protein 28.
   
 
 0.808
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.807
LOC110091757
Phosphoethanolamine N-methyltransferase 3-like.
   
 0.800
RPS3
Small subunit ribosomal protein S3e.
   
 0.782
RPS11
Small subunit ribosomal protein S11e.
   
 0.773
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.