Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSTF2Cleavage stimulation factor subunit 2. (583 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.998
CSTF1
Cleavage stimulation factor subunit 1 isoform X1.
    
 0.998
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
    
 0.988
CPSF1
Cleavage and polyadenylation specificity factor subunit 1 isoform X1.
   
 0.984
CPSF4
Cleavage and polyadenylation specificity factor subunit 4.
   
 0.983
SYMPK
Symplekin.
   
 0.982
CPSF3
Cleavage and polyadenylation specificity factor subunit 3 isoform X1.
   
 0.981
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.979
WDR33
Pre-mRNA 3' end processing protein WDR33.
    
 0.962
CLP1
Polyribonucleotide 5'-hydroxyl-kinase Clp1.
   
 0.957
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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