Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPHOSPH6M-phase phosphoprotein 6, animal type. (213 aa)    
Predicted Functional Partners:
C1D
Nuclear nucleic acid-binding protein C1D.
   
 0.998
EXOSC10
Exosome component 10.
   
 0.997
EXOSC3
Exosome complex component RRP40.
   
 0.992
EXOSC9
Exosome complex component RRP45 isoform X1.
    
 0.990
EXOSC1
Exosome complex component CSL4.
   
 0.990
EXOSC5
Exosome complex component RRP46.
   
 0.989
ENSPVIP00000029685
annotation not available
   
 0.988
EXOSC7
Exosome complex component RRP42.
    
 0.987
EXOSC2
Exosome complex component RRP4.
   
 0.987
MTREX
Superkiller viralicidic activity 2-like 2.
    
 0.985
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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