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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INO80DINO80 complex subunit D. (1030 aa)    
Predicted Functional Partners:
INO80E
INO80 complex subunit E.
    
 0.980
INO80C
INO80 complex subunit C.
    
 0.968
INO80
DNA helicase INO80.
   
 0.950
RUVBL1
RuvB-like protein 1 (pontin 52).
    
  0.949
RUVBL2
RuvB-like protein 2.
    
 0.946
TFPT
TCF3 fusion partner.
    
 0.945
MED13
Mediator of RNA polymerase II transcription subunit 13 isoform X1.
   
 0.927
ACTR8
Actin-related protein 8.
    
 0.925
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
    
 0.924
MCRS1
Microspherule protein 1 isoform X1.
    
 0.921
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.