STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UFL1E3 UFM1-protein ligase 1. (794 aa)    
Predicted Functional Partners:
CDK5RAP3
CDK5 regulatory subunit-associated protein 3 isoform X1.
   
 
 0.994
DDRGK1
DDRGK domain containing 1.
    
 
 0.976
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1.
    
 
 0.976
UFM1
Ubiquitin fold modifier 1.
   
 
 0.937
UFSP1
Inactive Ufm1-specific protease 1.
   
  
 0.850
UBA5
Ubiquitin-like modifier-activating enzyme 5 isoform X1.
   
 
 0.836
RPL26
Large subunit ribosomal protein L26e.
    
 
 0.764
SRPRB
Signal recognition particle receptor subunit beta.
      
 0.731
EIF6
Eukaryotic translation initiation factor 6.
    
 
 0.730
UFSP2
Ufm1-specific protease 2 isoform X1.
   
  
 0.713
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.