STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL13AADP ribosylation factor like GTPase 13A. (388 aa)    
Predicted Functional Partners:
ENSPVIP00000014724
annotation not available
   
 0.737
COG6
Conserved oligomeric Golgi complex subunit 6.
    
 0.703
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
    
 0.684
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
     
 0.666
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
     
 0.657
ARL1
ADP-ribosylation factor-like protein 1 isoform X1.
    
0.654
IFT88
Intraflagellar transport protein 88 homolog isoform X1.
    
 0.599
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
     
 0.592
VPS51
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog.
     
 0.585
RGP1
RAB6A-GEF complex partner protein 2.
    
  0.580
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.