Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL13AADP ribosylation factor like GTPase 13A. (388 aa)    
Predicted Functional Partners:
ENSPVIP00000014724
annotation not available
   
 0.775
COG6
Conserved oligomeric Golgi complex subunit 6.
    
 0.726
STX16
Syntaxin-16 isoform X1.
    
 0.669
ARL1
ADP-ribosylation factor-like protein 1 isoform X1.
    
 0.663
IFT81
Intraflagellar transport protein 81 homolog.
    
 
 0.626
IFT22
Intraflagellar transport protein 22 homolog.
    
 
 0.605
IFT88
Intraflagellar transport protein 88 homolog isoform X1.
    
 0.560
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
     
 0.560
TMF1
TATA element modulatory factor.
     
 0.559
IFT52
Intraflagellar transport protein 52 homolog isoform X1.
    
 
 0.549
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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