STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRP2Neuropilin-2 isoform X1. (944 aa)    
Predicted Functional Partners:
SEMA3F
Semaphorin-3F isoform X1.
    
 
 0.945
VEGFC
Vascular endothelial growth factor C/D.
    
 
 0.921
ST8SIA2
Alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8B).
    
 
 0.808
TRAPPC12
Trafficking protein particle complex subunit 12.
      
 0.791
FLT4
Vascular endothelial growth factor receptor 3 isoform X1.
     
 0.776
SEMA3C
Semaphorin-3C.
    
 
 0.771
FLT1
LOW QUALITY PROTEIN: vascular endothelial growth factor receptor 1.
  
  
 0.721
PDGFRL
Platelet-derived growth factor receptor-like protein.
     
 0.711
LOC110087957
Platelet-derived growth factor receptor-like protein.
     
 0.711
PDGFRB
Platelet-derived growth factor receptor beta.
     
 0.706
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.