STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM1BLysine-specific histone demethylase 1B isoform X1. (885 aa)    
Predicted Functional Partners:
GLYR1
Putative oxidoreductase GLYR1 isoform X1.
    
 
 0.924
RCOR1
REST corepressor 1.
   
 0.872
ASXL2
ASXL transcriptional regulator 2.
    
 0.869
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1.
    
 0.794
RCOR3
REST corepressor 3 isoform X1.
   
 0.785
RCOR2
REST corepressor 2.
   
 0.785
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 
 0.707
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 
 0.707
HDAC2
Histone deacetylase 2 isoform X1.
   
 0.629
HDAC1
Histone deacetylase 1/2.
   
 0.629
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.