Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
KDM1BLysine-specific histone demethylase 1B isoform X1. (885 aa)    
Predicted Functional Partners:
ASXL2
ASXL transcriptional regulator 2.
    
 0.981
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1.
   
 0.958
MBD5
Methyl-CpG-binding domain protein 5 isoform X1.
   
 0.820
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1.
   
 0.817
HCFC2
Host cell factor 2.
   
 
 0.806
HCFC1
Host cell factor C1.
   
 
 0.806
RCOR1
REST corepressor 1.
    
 0.797
FOXK1
Forkhead box protein K1.
   
 0.779
FOXK2
Forkhead box protein K2.
   
 0.779
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
   
 0.747
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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