STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALPK1Alpha-protein kinase 1 isoform X1. (1248 aa)    
Predicted Functional Partners:
TIFA
TRAF-interacting protein with FHA domain-containing protein A.
   
 
 0.865
LOC110078476
Calcium-binding protein 5 isoform X1.
      
 0.679
MAP3K7
Mitogen-activated protein kinase kinase kinase 7 isoform X1.
     
 0.561
TDRD7
Tudor domain-containing protein 7 isoform X1.
   
    0.550
ENSPVIP00000001121
annotation not available
     
 0.504
TRAF6
TNF receptor-associated factor 6.
     
 0.504
AGMO
Alkylglycerol monooxygenase.
      
 0.475
MAP3K20
Mitogen-activated protein kinase kinase kinase MLT isoform X1.
     
 0.451
IRAK2
Interleukin-1 receptor-associated kinase-like 2 isoform X1.
     
 0.440
IRAK1
Interleukin-1 receptor-associated kinase 1-like.
     
 0.432
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.