STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALPK1Alpha-protein kinase 1 isoform X1. (1248 aa)    
Predicted Functional Partners:
TIFA
TRAF-interacting protein with FHA domain-containing protein A.
   
 0.964
TAB3
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1.
     
 0.629
LOC110078476
Calcium-binding protein 5 isoform X1.
      
 0.629
ENSPVIP00000001121
annotation not available
     
 0.617
RPS27A
Ribosomal protein S27a.
     
  0.617
TRAF6
TNF receptor-associated factor 6.
     
 0.617
TAB1
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1.
     
  0.617
SASS6
Spindle assembly abnormal protein 6 homolog isoform X1.
      
 0.609
BMT2
Probable methyltransferase BMT2 homolog isoform X1.
      
 0.571
REXO5
Putative RNA exonuclease NEF-sp.
      
 0.570
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.