Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000003496annotation not available (161 aa)    
Predicted Functional Partners:
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
    
   0.776
TRMT1
TRNA (guanine26-N2/guanine27-N2)-dimethyltransferase.
    
   0.737
TULP2
Tubby-related protein 2 isoform X1.
   
  
 0.634
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
      
 0.623
SPATA16
Spermatogenesis-associated protein 16 isoform X1.
      
 0.586
RTF1
RNA polymerase-associated protein RTF1 homolog isoform X1.
      
 0.578
CUNH12orf40
Uncharacterized protein C12orf40 homolog.
      
 0.570
SPACA9
Sperm acrosome-associated protein 9 isoform X1.
      
 0.515
PRRX1
Paired mesoderm homeobox protein 1 isoform X1.
      
 0.485
NRIP3
Nuclear receptor-interacting protein 3.
      
 0.473
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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