STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPTNOptineurin. (639 aa)    
Predicted Functional Partners:
TBK1
LOW QUALITY PROTEIN: serine/threonine-protein kinase TBK1.
   
 0.987
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.969
LOC110071800
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.961
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
   
 0.950
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.950
IKBKE
Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.
   
 0.880
UBC
Polyubiquitin-C.
   
 0.877
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
    
 
 0.872
RPS27A
Ribosomal protein S27a.
   
 0.813
RIPK1
Receptor-interacting serine/threonine-protein kinase 1 isoform X1.
    
 0.743
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.