STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPTNOptineurin. (639 aa)    
Predicted Functional Partners:
TBK1
LOW QUALITY PROTEIN: serine/threonine-protein kinase TBK1.
   
 0.990
SQSTM1
Sequestosome-1 isoform X1.
    
 0.979
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.975
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.970
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.970
NBR1
Next to BRCA1 gene 1 protein.
    
 0.964
TAX1BP1
Tax1 binding protein 1.
   
 0.962
UBC
Polyubiquitin-C.
    
 0.961
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
   
 0.956
MYO6
Unconventional myosin-VI isoform X1.
    
 
 0.951
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.