Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAMK1DCalcium/calmodulin-dependent protein kinase type 1D. (392 aa)    
Predicted Functional Partners:
CALM2
Calmodulin.
    
 0.806
CALML6
Calmodulin-like protein 6.
    
 0.750
CALML4
Calmodulin-like protein 4 isoform X1.
    
 0.716
DCX
Neuronal migration protein doublecortin isoform X1.
 
  
 
 0.549
CALM1
Calmodulin 1.
    
 0.471
LOC110081032
Calmodulin.
    
 0.471
CALM3
Calmodulin 3.
    
 0.471
LOC110081351
Uncharacterized protein LOC110081351 isoform X1.
    
 0.471
ENSPVIP00000029752
annotation not available
    
 0.471
ENSPVIP00000006312
annotation not available
   
 
 0.429
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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