Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La-related protein 7. (595 aa)    
Predicted Functional Partners:
MEPCE
7SK snRNA methylphosphate capping enzyme.
   
 
 0.994
CDK9
Cyclin dependent kinase 9.
   
 0.981
CCNT1
Cyclin-T1.
   
 0.980
CCNT2
Cyclin-T2 isoform X1.
   
 0.974
SART3
Squamous cell carcinoma antigen recognized by T-cells 3.
   
 0.948
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.913
NCL
Nucleolin.
   
 0.908
SSB
Lupus La protein.
   
 
 0.907
SPINDOC
Uncharacterized protein C11orf84 homolog isoform X1.
      
 0.904
ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X1.
   
 
 0.894
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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