Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC61A2Protein transport protein SEC61 subunit alpha. (495 aa)    
Predicted Functional Partners:
SEC61B
Protein transport protein SEC61 subunit beta.
   
 0.990
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
   
 0.989
SEC63
Translocation protein SEC63 homolog.
   
 
 0.985
RPL11
60S ribosomal protein L11 isoform X1.
  
 
 0.953
RPL23A
Large subunit ribosomal protein L23Ae.
  
 
 0.943
RPL5
Large subunit ribosomal protein L5e.
 
 
 0.940
RPS11
Small subunit ribosomal protein S11e.
  
 
 0.936
RPL26
Large subunit ribosomal protein L26e.
  
 
 0.931
RPL8
Large subunit ribosomal protein L8e.
  
 
 0.931
RPN1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1.
   
 0.931
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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