STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC10Histone deacetylase 10 isoform X1. (683 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
    
 0.736
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.736
WDR90
WD repeat-containing protein 90-like.
    
 0.656
MEF2D
LOW QUALITY PROTEIN: myocyte-specific enhancer factor 2D.
   
 
 0.655
UBE2I
Ubiquitin-conjugating enzyme E2 I.
    
 0.652
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 0.649
ENSPVIP00000006312
annotation not available
   
 
 0.647
NME8
Thioredoxin domain-containing protein 3.
   
 
 0.647
ENSPVIP00000006316
annotation not available
   
 
 0.647
EP300
Histone acetyltransferase p300 isoform X1.
    
 0.643
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.