STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYRM2LYR motif containing 2. (120 aa)    
Predicted Functional Partners:
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.
    
 
 0.877
ENSPVIP00000011407
annotation not available
    
 0.853
NDUFAB1
NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein.
    
 0.853
LYRM1
LYR motif-containing protein 1.
      
 0.609
ETFRF1
Electron transfer flavoprotein regulatory factor 1.
   
  
 0.607
PALB2
Partner and localizer of BRCA2 isoform X1.
    
 0.603
LYRM9
LYR motif-containing protein 9.
      
 0.576
NDUFA6
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6.
     
 0.528
WDR55
WD repeat-containing protein 55.
      
 0.522
NDUFAF4
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4.
     
 0.519
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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