STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC44A5Solute carrier family 44 (choline transporter-like protein), member 2/4/5. (703 aa)    
Predicted Functional Partners:
PPT1
Palmitoyl-protein thioesterase 1.
   
  
 0.651
LMNTD2
Lamin tail domain-containing protein 2.
      
 0.565
MAPK13
Mitogen-activated protein kinase 13.
      
 0.479
DDIT4
DNA damage-inducible transcript 4 protein.
      
 0.452
RIMS4
Regulating synaptic membrane exocytosis protein 4.
      
 0.430
NCL
Nucleolin.
      
 0.423
PIBF1
LOW QUALITY PROTEIN: progesterone-induced-blocking factor 1.
      
 0.420
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.