STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2J1Ubiquitin-conjugating enzyme E2 J1 isoform X1. (352 aa)    
Predicted Functional Partners:
SEL1L
Protein sel-1 homolog 1.
   
 
 0.969
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
  0.912
LOC110071800
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.908
AUP1
Ancient ubiquitous protein 1.
   
 
 0.865
SYVN1
E3 ubiquitin-protein ligase synoviolin isoform X1.
    
 
 0.843
AMFR
Autocrine motility factor receptor.
    
 
 0.843
SEL1L2
Protein sel-1 homolog 2.
   
 
 0.806
UBE2W
Ubiquitin-conjugating enzyme E2 W isoform X1.
     
 0.801
UBE2G2
Ubiquitin-conjugating enzyme E2 G2.
    
 0.799
UBE2H
Ubiquitin-conjugating enzyme E2 H.
    
 0.795
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.