STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPHP3Nephrocystin-3. (1317 aa)    
Predicted Functional Partners:
UNC119B
Unc-119 lipid binding chaperone B.
    
 0.979
UNC119
Protein unc-119 homolog A.
    
 0.941
INVS
Inversin-like.
    
 0.827
ARL3
ADP-ribosylation factor-like protein 3 isoform X1.
    
 0.817
CABP1
Calcium-binding protein 1 isoform X1.
    
 0.788
CABP2
Calcium-binding protein 1/2/4/5.
    
 0.788
ALDH4A1
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial.
   
 
 0.719
GTPBP2
GTP-binding protein 2.
    
 
 0.711
ENSPVIP00000032589
annotation not available
    
 
 0.709
NEK8
NIMA (never in mitosis gene a)-related kinase 8.
    
 
 0.705
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.