STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGGTBGeranylgeranyl transferase type-2 subunit beta. (335 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.999
PTAR1
Protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1.
    
 0.985
LOC110070577
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.902
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.902
YKT6
Synaptobrevin homolog YKT6.
    
 
 0.856
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
   
 0.844
GDI1
Rab GDP dissociation inhibitor alpha.
   
 0.844
RAB1A
Ras-related protein Rab-1A.
    
 0.819
RAB1B
Ras-related protein Rab-1B.
    
 0.819
LOC110075697
Ras-related protein ORAB-1-like isoform X1.
    
 0.819
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.