Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RABGGTBGeranylgeranyl transferase type-2 subunit beta. (335 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.999
PTAR1
Protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1.
    
 0.987
PTP4A1
Protein tyrosine phosphatase type IVA 1.
    
  0.935
PTP4A2
Protein tyrosine phosphatase type IVA 2.
    
  0.935
LOC110070577
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.916
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.916
YKT6
Synaptobrevin homolog YKT6.
    
 
 0.901
RAB1A
Ras-related protein Rab-1A.
    
 0.855
RAB1B
Ras-related protein Rab-1B.
    
 0.855
LOC110075697
Ras-related protein ORAB-1-like isoform X1.
    
 0.855
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.