STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH4MutS protein homolog 4 isoform X1. (886 aa)    
Predicted Functional Partners:
MSH5
DNA mismatch repair protein MSH5.
  
0.994
MLH1
DNA mismatch repair protein MLH1.
  
 0.924
ENSPVIP00000026956
annotation not available
 
 0.908
DMRT1
Doublesex- and mab-3-related transcription factor 1.
      
 0.897
PMS1
PMS1 protein homolog 1 isoform X1.
 
 0.894
MLH3
DNA mismatch repair protein Mlh3 isoform X1.
  
 0.886
SYCP3
Synaptonemal complex protein 3.
      
 0.867
RAD51
DNA repair protein RAD51 homolog 1.
   
 0.858
TOP3A
DNA topoisomerase 3-alpha.
  
 0.838
SPO11
Meiotic recombination protein SPO11 isoform X1.
   
 
 0.809
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.