STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCM1Pericentriolar material 1 protein isoform X1. (2130 aa)    
Predicted Functional Partners:
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
   
 
 0.971
CEP131
Centrosomal protein 131.
   
 0.967
CEP72
Centrosomal protein of 72 kDa.
    
 
 0.966
ENSPVIP00000032589
annotation not available
   
 
 0.956
OFD1
Oral-facial-digital syndrome 1 protein isoform X1.
   
 
 0.954
AKAP9
A-kinase anchoring protein 9.
   
 0.943
PLK1
Serine/threonine-protein kinase PLK1.
    
 0.928
MIB1
E3 ubiquitin-protein ligase mind-bomb.
    
 0.911
FOPNL
LisH domain-containing protein FOPNL.
    
 
 0.889
CCDC14
Coiled-coil domain-containing protein 14.
    
 
 0.888
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.