STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACKR4Atypical chemokine receptor 4. (354 aa)    
Predicted Functional Partners:
ENSPVIP00000021379
annotation not available
   
 0.984
LOC110084977
Atypical chemokine receptor 1-like.
      
 0.695
CXCL12
Stromal cell-derived factor 1.
    
 0.590
DHODH
Dihydroorotate dehydrogenase (quinone).
      
 0.555
ENSPVIP00000009591
annotation not available
   
 0.504
LOC110083276
C-C motif chemokine 4-like.
   
 0.504
ENSPVIP00000022666
annotation not available
      
 0.482
PI16
Peptidase inhibitor 16 isoform X1.
      
 0.460
SHISA3
Shisa family member 3.
   
  
 0.441
CMTM7
CKLF-like MARVEL transmembrane domain-containing protein 7.
      
 0.439
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.