STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUBP1Far upstream element-binding protein 1 isoform X1. (860 aa)    
Predicted Functional Partners:
PUF60
Poly(U)-binding-splicing factor PUF60 isoform X1.
   
 
 0.809
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 
 0.712
YWHAZ
14-3-3 protein beta/theta/zeta.
   
 
 0.634
PARN
Poly(A)-specific ribonuclease PARN isoform X1.
   
 0.621
EXOSC2
Exosome complex component RRP4.
   
  0.507
DCP2
M7GpppN-mRNA hydrolase isoform X1.
     
 0.502
QKI
Protein quaking isoform X1.
   
 
 0.485
EXOSC5
Exosome complex component RRP46.
   
 
 0.482
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.466
TK1
Thymidine kinase, cytosolic.
      
 0.463
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.