STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1CDNA cross-link repair 1C protein. (722 aa)    
Predicted Functional Partners:
PRKDC
LOW QUALITY PROTEIN: DNA-dependent protein kinase catalytic subunit.
    
 0.996
XRCC6
X-ray repair cross-complementing protein 6 isoform X1.
   
 0.990
XRCC5
X-ray repair cross-complementing protein 5.
    
 0.989
LIG4
DNA ligase 4 isoform X1.
  
 0.972
ERCC1
DNA excision repair protein ERCC-1 isoform X1.
     
 0.962
XRCC1
DNA repair protein XRCC1 isoform X1.
     
 0.924
MSH2
DNA mismatch repair protein MSH2.
   
 0.921
FANCD2
FA complementation group D2.
   
 0.918
FANCI
FA complementation group I.
   
 
 0.912
ERCC4
DNA excision repair protein ERCC-4.
   
 0.909
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.