STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD1CUB and sushi domain-containing protein 1 isoform X1. (3435 aa)    
Predicted Functional Partners:
TSSC4
Protein TSSC4.
      
 0.565
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
    
 0.494
ZHX2
Zinc fingers and homeoboxes protein 2.
     
 0.441
TNN
Tenascin N.
    
  0.433
TNR
Tenascin-R isoform X1.
    
  0.433
ENSPVIP00000015927
annotation not available
    
  0.433
ENSPVIP00000015931
annotation not available
    
  0.433
ENSPVIP00000023757
Tenascin-like.
    
  0.433
TNC
Tenascin C.
    
  0.433
SH2D4A
SH2 domain containing 4A.
      
 0.417
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (20%) [HD]