Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDRG1P53 and DNA damage-regulated protein 1. (130 aa)    
Predicted Functional Partners:
PFDN2
Prefoldin subunit 2.
    
 
 0.976
PFDN4
Prefoldin subunit 4.
    
 
 0.976
UXT
Protein UXT.
   
 
 0.973
RPAP3
RNA polymerase II-associated protein 3 isoform X1.
    
 
 0.967
PIH1D1
PIH1 domain containing 1.
    
 
 0.967
URI1
Unconventional prefoldin RPB5 interactor 1.
    
 
 0.958
POLR2E
RNA polymerase II subunit E.
    
 
 0.936
LOC110071373
Prefoldin subunit 6-like.
    
 
 0.904
ENSPVIP00000004832
annotation not available
    
 
 0.904
RUVBL1
RuvB-like protein 1 (pontin 52).
    
 
 0.901
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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