Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110071890Isopentenyl-diphosphate Delta-isomerase 1. (289 aa)    
Predicted Functional Partners:
MVD
Diphosphomevalonate decarboxylase isoform X1.
  
 
 0.998
FDPS
Farnesyl pyrophosphate synthase.
  
 
 0.990
SQLE
Squalene monooxygenase.
   
  
 0.976
HMGCS1
Hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1.
  
  
 0.975
GGPS1
Geranylgeranyl diphosphate synthase, type III.
  
 
 0.972
CYP51A1
Lanosterol 14-alpha demethylase.
  
  
 0.949
MTHFR
Methylenetetrahydrofolate reductase.
     
 0.865
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1.
  
 
 0.863
LMO4
LIM domain transcription factor LMO4.
    
   0.860
PMVK
Phosphomevalonate kinase.
   
 
 0.856
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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