STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP4Nucleolar GTP-binding protein 1 isoform X1. (634 aa)    
Predicted Functional Partners:
DDX18
ATP-dependent RNA helicase DDX18/HAS1.
   
 0.999
PUM3
Pumilio homology domain family member 6.
   
 0.999
EIF6
Eukaryotic translation initiation factor 6.
   
 0.999
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 0.999
NSA2
Ribosome biogenesis protein NSA2 homolog.
   
 0.999
NIP7
60S ribosome subunit biogenesis protein NIP7 homolog.
   
 0.999
MAK16
Protein MAK16 homolog isoform X1.
   
 0.999
BRIX1
Ribosome biogenesis protein BRX1 homolog.
   
 0.999
GNL2
Nucleolar GTP-binding protein 2.
   
 0.999
FTSJ3
LOW QUALITY PROTEIN: pre-rRNA processing protein FTSJ3.
   
 0.999
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.