STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNFNCornifelin homolog B-like. (113 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12.
   
 0.929
LOC110071800
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.927
BIRC6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 0.692
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
   
 0.666
PEX12
Peroxisome assembly protein 12.
   
 0.660
RPS27A
Ribosomal protein S27a.
   
 0.634
PEX10
Peroxisome biogenesis factor 10.
    
 0.620
PCNA
Proliferating cell nuclear antigen isoform X1.
   
 0.617
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2 isoform X1.
   
 0.611
SKP1
S-phase kinase-associated protein 1.
   
 0.602
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.