STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDGFRALOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha. (1081 aa)    
Predicted Functional Partners:
PDGFRB
Platelet-derived growth factor receptor beta.
   
0.999
PDGFB
Platelet-derived growth factor subunit B isoform X1.
   
 0.999
PDGFC
Platelet-derived growth factor C isoform X1.
    
 0.993
BICC1
Protein bicaudal C homolog 1.
   
  
 0.985
GRB2
Growth factor receptor-binding protein 2.
    
 0.982
PDGFA
Platelet-derived growth factor subunit A.
    
 0.978
PDGFD
Platelet derived growth factor C/D.
    
 0.954
SRC
Proto-oncogene tyrosine-protein kinase Src isoform X1.
    
0.949
EGF
LOW QUALITY PROTEIN: pro-epidermal growth factor.
     
 0.945
SOS1
Son of sevenless homolog 1.
    
 0.942
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.