STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086777Toll-like receptor 13. (968 aa)    
Predicted Functional Partners:
MYD88
Myeloid differentiation primary response protein MyD88.
    
 0.769
UNC93B1
Protein unc-93 homolog B1.
    
 0.707
LY96
Lymphocyte antigen 96.
   
 0.576
RIPK1
Receptor-interacting serine/threonine-protein kinase 1 isoform X1.
    
 0.561
ENSPVIP00000001121
annotation not available
   
 0.559
TRAF6
TNF receptor-associated factor 6.
   
 0.559
TIRAP
Toll-interleukin 1 receptor (TIR) domain-containing adaptor protein.
   
 0.481
ENSPVIP00000014198
TIR domain-containing adapter molecule 2.
    
 0.465
LOC110072046
TIR domain-containing adapter molecule 2.
    
 0.465
TICAM1
TIR domain-containing adapter molecule 1.
    
 0.465
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.