Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATRNAttractin. (1367 aa)    
Predicted Functional Partners:
MGRN1
E3 ubiquitin-protein ligase MGRN1.
   
 
 0.807
MOSMO
Uncharacterized protein C16orf52 homolog.
    
 
 0.596
RNF157
RING finger protein 157 isoform X1.
   
 
 0.590
ANKRD46
Ankyrin repeat domain-containing protein 46.
    
   0.584
BCS1L
Mitochondrial chaperone BCS1.
      
 0.564
CTSF
Cathepsin F.
      
 0.533
TBC1D31
TBC1 domain family member 31.
    
 0.530
TBC1D31-2
TBC1 domain family member 31.
    
 0.530
TYRP1
Tyrosinase related protein 1.
      
 0.505
ASIP
Agouti signaling protein.
    
 
 0.500
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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