STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOCKCircadian locomoter output cycles protein kaput isoform X1. (885 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.934
CRY2
Cryptochrome-2.
    
 0.901
ARNTL2
Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.
   
0.879
CRY1
Cryptochrome-1.
    
 0.859
NPAS4
Neuronal PAS domain-containing protein 4.
    
0.753
TIMELESS
Protein timeless homolog isoform X1.
   
 0.749
AHR
Aryl hydrocarbon receptor.
   
0.707
PER2
Period circadian protein homolog 2 isoform X1.
    
0.704
LOC110085830
Deoxyribodipyrimidine photo-lyase.
    
 0.688
LOC110073388
Cryptochrome-1-like.
    
 0.688
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.