Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3HC1Nuclear-interacting partner of ALK. (503 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
    
 0.926
CUL1
Cullin-1 isoform X1.
    
  0.915
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.837
RNF166
RING finger protein 166.
      
 0.696
CCNB1
Cyclin B1.
    
 
 0.652
CCNB2
G2/mitotic-specific cyclin-B2 isoform X1.
    
 
 0.652
CNTD2
Cyclin N-terminal domain-containing protein 2.
    
 
 0.652
KPTN
Kaptin, actin binding protein.
      
 0.649
TPR
Nucleoprotein TPR.
    
 
 0.638
NOL7
Nucleolar protein 7 isoform X1.
      
 0.633
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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