STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM209Transmembrane protein 209 isoform X1. (542 aa)    
Predicted Functional Partners:
CCDC58
Coiled-coil domain-containing protein 58 isoform X1.
      
 0.574
LYRM7
Complex III assembly factor LYRM7.
      
 0.501
PUM3
Pumilio homology domain family member 6.
      
 0.489
DDO
D-aspartate oxidase.
      
 0.470
CGGBP1
CGG triplet repeat-binding protein 1 isoform X1.
      
 0.453
NUP93
Nuclear pore complex protein Nup93 isoform X1.
      
 0.434
UCK2
Uridine-cytidine kinase 2 isoform X1.
      
 0.433
UCK1
Uridine-cytidine kinase 1.
      
 0.433
GGCX
Vitamin K-dependent gamma-carboxylase.
      
 0.404
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.