STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNX1Motor neuron and pancreas homeobox 1. (401 aa)    
Predicted Functional Partners:
TBX20
T-box transcription factor TBX20.
    
 
 0.692
VIPR1
Vasoactive intestinal polypeptide receptor 1.
      
 0.659
PTF1A
Pancreas transcription factor 1 subunit alpha.
    
 
 0.657
TSPAN2
Tetraspanin-2.
      
 0.619
RFX4
Transcription factor RFX4.
      
 0.616
GLIS3
Zinc finger protein GLIS1/3.
    
 
 0.576
GDF15
Growth differentiation factor 15.
      
 0.572
POU1F1
Pituitary-specific positive transcription factor 1.
    
 
 0.566
PTGS1
Prostaglandin-endoperoxide synthase 1.
      
 0.535
WT1
Wilms tumor protein isoform X1.
    
 
 0.521
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.