STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL1LProtein sel-1 homolog 1. (803 aa)    
Predicted Functional Partners:
DERL1
Derlin-1.
   
 0.990
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
   
 0.970
FAM8A1
Family with sequence similarity 8 member A1.
    
 0.962
RNF139
E3 ubiquitin-protein ligase RNF139.
    
 0.947
SELENOS
Selenoprotein S.
   
 
 0.946
DERL3
Uncharacterized LOC110081966.
   
 0.918
DERL2
Derlin-2/3.
   
 0.918
SYVN1
E3 ubiquitin-protein ligase synoviolin isoform X1.
   
 0.904
AMFR
Autocrine motility factor receptor.
   
 0.904
SEL1L2
Protein sel-1 homolog 2.
  
  
 
0.903
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.