Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1Limb region 1 protein homolog. (489 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
    
 
 0.674
WNT8B
Wingless-type MMTV integration site family, member 8.
      
 0.570
CIB3
Calcium and integrin-binding family member 3 isoform X1.
      
 0.521
LUM
Lumican.
      
 0.519
SLC35F3
Putative thiamine transporter SLC35F3 isoform X1.
      
 0.488
RNF32
RING finger protein 32 isoform X1.
    
 
 0.482
ZBTB16
Zinc finger and BTB domain-containing protein 16.
     
 0.482
PHLPP1
PH domain and leucine-rich repeat-containing protein phosphatase.
      
 0.481
PEAK1
Pseudopodium-enriched atypical kinase 1 isoform X1.
      
 0.481
NOM1
Nucleolar MIF4G domain-containing protein 1 isoform X1.
      
 0.479
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.