STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHHSonic hedgehog protein. (424 aa)    
Predicted Functional Partners:
PTCH1
Protein patched homolog 1 isoform X1.
   
 0.992
DISP1
Protein dispatched homolog 1 isoform X1.
   
 0.988
HHIP
Hedgehog-interacting protein isoform X1.
    
 0.986
PTCH2
Protein patched homolog 2 isoform X1.
   
 0.985
CDON
Cell adhesion molecule-related/down-regulated by oncogenes.
    
 0.981
BOC
Brother of CDO isoform X1.
    
 0.981
GAS1
Growth arrest-specific protein 1.
    
 0.966
IHH
Indian hedgehog protein.
  
  
0.905
LRP2
LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 2.
     
 0.903
DHH
Desert hedgehog protein.
  
  
 
0.902
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.