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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNKCyclin-K isoform X1. (609 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9.
   
 0.974
CDK13
Cyclin-dependent kinase 12/13.
   
 0.974
CDK12
Cyclin-dependent kinase 12 isoform X1.
   
 0.974
SUPT5H
Transcription elongation factor SPT5.
    
 0.968
CCNH
Cyclin H.
     
 0.962
CDC73
Parafibromin.
   
 0.960
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.956
LEO1
RNA polymerase-associated protein LEO1.
    
 0.954
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
   
 0.952
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.942
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.