Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOX18Transcription factor SOX7/8/10/18 (SOX group E/F). (402 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
    
 0.836
LOC110070984
POU domain, class 5, transcription factor 1-like isoform X1.
    
 0.779
LOC110077941
Homeobox protein NANOG-like.
    
 0.746
TFAP2C
Transcription factor AP-2 gamma isoform X1.
   
 0.740
GATA6
Transcription factor GATA-6 isoform X1.
   
 0.669
CXCR4
C-X-C chemokine receptor type 4.
   
 
 0.664
EOMES
Eomesodermin homolog isoform X1.
    
 0.662
FOXA1
Forkhead box A1.
    
 0.647
LEF1
Lymphoid enhancer binding factor 1.
    
 0.635
PRDM1
PR domain zinc finger protein 1.
    
 0.633
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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